Difference between revisions of "TSS:Mm 100163.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NR_003376:0 AK050732:0 BC119080:10 BC116983:11 ENSMUST00000057676.6:-101 NM_176902:-101 uc007mlb.1:-101 AK144901:-101 ENSMUST00000144310.1:282 BC080725:...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1914635 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-2 | |distance_to_tss=-2 | ||
|end=116434227 | |end=116434227 | ||
| + | |end_of_center_position=116434211 | ||
|entrez_id=664849 | |entrez_id=664849 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_003376 | |nearest_refseq=NR_003376 | ||
|nearest_unigene=Mm.258466 | |nearest_unigene=Mm.258466 | ||
| − | |num_trans= | + | |num_trans=319370 |
|species=mouse | |species=mouse | ||
|start=116434194 | |start=116434194 | ||
| + | |start_of_center_position=116434210 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK050732 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100163.1 | |tss_id=mm_100163.1 | ||
Latest revision as of 10:32, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 116434210 |
|---|---|
| End of the center position in the TSS region: | 116434211 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK050732 |
|---|---|
| Distance: | 0 |
| Num_trans: | 319370 |
| All_trans: | MGI:1914635 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_003376 |
| Entrez ID: | 664849 |
| Nearest Unigene: | Mm.258466 |
| Nearest Refseq: | NR_003376 |
| Nearest Ensembl: | |
| Gene Name: | UBA-like domain containing 2; predicted pseudogene 7367 |
| Gene Alias: | EG664849 |
| Gene Description: | 1110014K08Rik pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.175 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
