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Difference between revisions of "TSS:Mm 100196.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000147508.1:294 BC018473:294 AF118847:-301 ENSMUST00000145570.7:-302 AK156340:-320 AK158468:-332 AF118272:-409 ENSMUST00000132056.7:-482 AF118273:-482 ENSMUST00000156293.7:-484 NR_003364:-484 uc007mmb.1:-484 uc007mmc.1:-484
+
|all_trans=MGI:3039625
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NR_003364
 
|nearest_refseq=NR_003364
 
|nearest_unigene=Mm.100084
 
|nearest_unigene=Mm.100084
|num_trans=13
+
|num_trans=193217
 
|species=mouse
 
|species=mouse
 
|start=116752650
 
|start=116752650

Latest revision as of 10:33, 26 July 2021

Basic information about the TSS


TSS ID:mm_100196.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:116752650
End:116752669
Strand:+
TSS Score:1
Start of the center position in the TSS region:116752659
End of the center position in the TSS region:116752660



Gene and protein annotation


Transcript_name:ENSMUST00000147508.1 BC018473
Distance:294
GeneID:193217
HGNC/MGI_ID:MGI:3039625
UniProt_ID:
Gene_name:cDNA sequence BC018473
Gene_symbol:BC018473
Gene_synonyms:
Gene_source:MGI:3039625



Transcript annotation


Transcript_name:ENSMUST00000147508.1 BC018473
Distance:294
Num_trans:193217
All_trans:MGI:3039625



TATA-Box annotation


Distance to TSS:493
Nearest PromoterID:NR_003364
Entrez ID:193217
Nearest Unigene:Mm.100084
Nearest Refseq:NR_003364
Nearest Ensembl:
Gene Name:cDNA sequence BC018473
Gene Alias:-
Gene Description:cDNA sequence BC018473
Gene Type:ncRNA
CpG%:0.01
GC%:0.447761
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):