Difference between revisions of "TSS:Mm 100202.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000175930.7:0 ENSMUST00000128784.1:0 AK016897:0 AK135294:0 AK168267:0 NM_028865:-5 uc007mmk.2:-5 uc007mml.2:-5 uc007mmm.2:-5 ENSMUST00000176765...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |1500035B17Rik= |
| + | |4933424L15Rik= | ||
| + | |all_trans=MGI:1921569 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
|end=116843569 | |end=116843569 | ||
| + | |end_of_center_position=116843545 | ||
|entrez_id=74319 | |entrez_id=74319 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=1110005A03Rik | + | |gene_alias=1110005A03Rik{{!}}1500035B17Rik{{!}}4933424L15Rik |
|gene_description=methyltransferase like 23 | |gene_description=methyltransferase like 23 | ||
|gene_id=74319 | |gene_id=74319 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_028865 | |nearest_refseq=NM_028865 | ||
|nearest_unigene=Mm.429312 | |nearest_unigene=Mm.429312 | ||
| − | |num_trans= | + | |num_trans=74319 |
|species=mouse | |species=mouse | ||
|start=116843519 | |start=116843519 | ||
| + | |start_of_center_position=116843544 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000175930.7 ENSMUST00000128784.1 | + | |transcript_name=ENSMUST00000175930.7 ENSMUST00000128784.1 AK135294 AK168267 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100202.1 | |tss_id=mm_100202.1 | ||
Latest revision as of 10:33, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116843544 |
|---|---|
| End of the center position in the TSS region: | 116843545 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000175930.7 ENSMUST00000128784.1 AK135294 AK168267 |
|---|---|
| Distance: | 0 |
| Num_trans: | 74319 |
| All_trans: | MGI:1921569 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_028865 |
| Entrez ID: | 74319 |
| Nearest Unigene: | Mm.429312 |
| Nearest Refseq: | NM_028865 |
| Nearest Ensembl: | ENSMUSG00000090266 |
| Gene Name: | methyltransferase like 23 |
| Gene Alias: | 1110005A03Rik|1500035B17Rik|4933424L15Rik |
| Gene Description: | methyltransferase like 23 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
