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Difference between revisions of "TSS:Mm 100203.1"

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Line 2: Line 2:
 
|1500035B17Rik=
 
|1500035B17Rik=
 
|4933424L15Rik=
 
|4933424L15Rik=
|all_trans=ENSMUST00000176765.1:0 BC026936:0 ENSMUST00000128784.1:-12 AK168267:-12 ENSMUST00000175930.7:-18 AK016897:-18 AK135294:-18 NM_028865:-58 uc007mmk.2:-58 uc007mml.2:-58 uc007mmm.2:-58 AK003450:67 ENSMUST00000176799.7:70 AK160133:70 ENSMUST00000132593.7:72 ENSMUST00000140869.1:72 ENSMUST00000106370.9:-295
+
|all_trans=MGI:1921569
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.12
 
|cpg_percent=0.12
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|entrez_id=74319
 
|entrez_id=74319
 
|gc_percent=0.726368
 
|gc_percent=0.726368
|gene_alias=1110005A03Rik
+
|gene_alias=1110005A03Rik{{!}}1500035B17Rik{{!}}4933424L15Rik
 
|gene_description=methyltransferase like 23
 
|gene_description=methyltransferase like 23
 
|gene_id=74319
 
|gene_id=74319
Line 24: Line 24:
 
|nearest_refseq=NM_028865
 
|nearest_refseq=NM_028865
 
|nearest_unigene=Mm.429312
 
|nearest_unigene=Mm.429312
|num_trans=17
+
|num_trans=74319
 
|species=mouse
 
|species=mouse
 
|start=116843572
 
|start=116843572

Latest revision as of 10:33, 26 July 2021

Basic information about the TSS


TSS ID:mm_100203.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:116843572
End:116843603
Strand:+
TSS Score:1
Start of the center position in the TSS region:116843587
End of the center position in the TSS region:116843588



Gene and protein annotation


Transcript_name:ENSMUST00000176765.1 BC026936
Distance:0
GeneID:74319
HGNC/MGI_ID:MGI:1921569
UniProt_ID:
Gene_name:methyltransferase like 23
Gene_symbol:Mettl23
Gene_synonyms:1110005A03Rik 1500035B17Rik 4933424L15Rik
Gene_source:MGI:1921569



Transcript annotation


Transcript_name:ENSMUST00000176765.1 BC026936
Distance:0
Num_trans:74319
All_trans:MGI:1921569



TATA-Box annotation


Distance to TSS:73
Nearest PromoterID:NM_028865
Entrez ID:74319
Nearest Unigene:Mm.429312
Nearest Refseq:NM_028865
Nearest Ensembl:ENSMUSG00000090266
Gene Name:methyltransferase like 23
Gene Alias:1110005A03Rik|1500035B17Rik|4933424L15Rik
Gene Description:methyltransferase like 23
Gene Type:protein-coding
CpG%:0.12
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):