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Difference between revisions of "TSS:Mm 100209.1"

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Line 5: Line 5:
 
|Sfrs10=
 
|Sfrs10=
 
|Sfrs2=
 
|Sfrs2=
|all_trans=ENSMUST00000135135.1:0 ENSMUST00000125920.1:-163 AK080006:-163 ENSMUST00000136012.7:281 NM_001361585:281 BC100547:281 ENSMUST00000126661.1:298 AK007898:298 ENSMUST00000021173.13:339 AK032043:339 AK031384:341 ENSMUST00000151944.2:348 ENSMUST00000106365.8:414 BC079583:414
+
|all_trans=MGI:1917150
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 27: Line 27:
 
|nearest_refseq=NM_178620
 
|nearest_refseq=NM_178620
 
|nearest_unigene=Mm.348004
 
|nearest_unigene=Mm.348004
|num_trans=14
+
|num_trans=69900
 
|species=mouse
 
|species=mouse
 
|start=116853457
 
|start=116853457

Latest revision as of 10:33, 26 July 2021

Basic information about the TSS


TSS ID:mm_100209.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:116853457
End:116853481
Strand:+
TSS Score:1
Start of the center position in the TSS region:116853469
End of the center position in the TSS region:116853470



Gene and protein annotation


Transcript_name:ENSMUST00000135135.1
Distance:0
GeneID:69900
HGNC/MGI_ID:MGI:1917150
UniProt_ID:
Gene_name:major facilitator superfamily domain containing 11
Gene_symbol:Mfsd11
Gene_synonyms:2600014M03Rik
Gene_source:MGI:1917150



Transcript annotation


Transcript_name:ENSMUST00000135135.1
Distance:0
Num_trans:69900
All_trans:MGI:1917150



TATA-Box annotation


Distance to TSS:-293
Nearest PromoterID:NM_001361585
Entrez ID:69900
Nearest Unigene:Mm.348004
Nearest Refseq:NM_178620
Nearest Ensembl:ENSMUSG00000020818
Gene Name:major facilitator superfamily domain containing 11
Gene Alias:2600014M03Rik
Gene Description:major facilitator superfamily domain containing 11
Gene Type:protein-coding
CpG%:0.085
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):