Difference between revisions of "TSS:Mm 100209.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MRF-1= |
| + | |Pr264= | ||
| + | |SC35= | ||
| + | |Sfrs10= | ||
| + | |Sfrs2= | ||
| + | |all_trans=MGI:1917150 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-293 |
|end=116853481 | |end=116853481 | ||
| − | |entrez_id= | + | |end_of_center_position=116853470 |
| + | |entrez_id=69900 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias= | + | |gene_alias=2600014M03Rik |
| − | |gene_description= | + | |gene_description=major facilitator superfamily domain containing 11 |
|gene_id=69900 | |gene_id=69900 | ||
|gene_name=major facilitator superfamily domain containing 11 | |gene_name=major facilitator superfamily domain containing 11 | ||
| Line 17: | Line 23: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1917150 | |hgnc_mgi_id=MGI:1917150 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSMUSG00000020818 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361585 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_178620 |
| − | |nearest_unigene=Mm. | + | |nearest_unigene=Mm.348004 |
| − | |num_trans= | + | |num_trans=69900 |
|species=mouse | |species=mouse | ||
|start=116853457 | |start=116853457 | ||
| + | |start_of_center_position=116853469 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000135135.1 | |transcript_name=ENSMUST00000135135.1 | ||
Latest revision as of 10:33, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116853469 |
|---|---|
| End of the center position in the TSS region: | 116853470 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000135135.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 69900 |
| All_trans: | MGI:1917150 |
TATA-Box annotation
| Distance to TSS: | -293 |
|---|---|
| Nearest PromoterID: | NM_001361585 |
| Entrez ID: | 69900 |
| Nearest Unigene: | Mm.348004 |
| Nearest Refseq: | NM_178620 |
| Nearest Ensembl: | ENSMUSG00000020818 |
| Gene Name: | major facilitator superfamily domain containing 11 |
| Gene Alias: | 2600014M03Rik |
| Gene Description: | major facilitator superfamily domain containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
