Difference between revisions of "TSS:Mm 100217.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1924222 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=21 | |distance_to_tss=21 | ||
|end=117076840 | |end=117076840 | ||
| + | |end_of_center_position=117076804 | ||
|entrez_id=76972 | |entrez_id=76972 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_027059 | |nearest_refseq=NR_027059 | ||
|nearest_unigene=Mm.309167 | |nearest_unigene=Mm.309167 | ||
| − | |num_trans= | + | |num_trans=76972 |
|species=mouse | |species=mouse | ||
|start=117076767 | |start=117076767 | ||
| + | |start_of_center_position=117076803 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000149822.2 ENSMUST00000233355.1 ENSMUST00000145438.1 ENSMUST00000182811.1 AK012687 AK171830 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100217.1 | |tss_id=mm_100217.1 | ||
Latest revision as of 10:33, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117076803 |
|---|---|
| End of the center position in the TSS region: | 117076804 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000149822.2 ENSMUST00000233355.1 ENSMUST00000145438.1 ENSMUST00000182811.1 AK012687 AK171830 |
|---|---|
| Distance: | 0 |
| Num_trans: | 76972 |
| All_trans: | MGI:1924222 |
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | NR_027059 |
| Entrez ID: | 76972 |
| Nearest Unigene: | Mm.309167 |
| Nearest Refseq: | NR_027059 |
| Nearest Ensembl: | ENSMUSG00000086859 |
| Gene Name: | small nucleolar RNA host gene 20 |
| Gene Alias: | 2810008D09Rik |
| Gene Description: | small nucleolar RNA host gene 20 |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
