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Difference between revisions of "TSS:Mm 10024.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=D83528:0 BC012702:-87 AK144694:-94 ENSMUST00000085573.11:-104 AK141097:-104 D78141:-109 NM_011633:-144 uc029qvg.2:-144 uc007edg.2:-144
+
|all_trans=MGI:107548
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 22: Line 22:
 
|nearest_refseq=NM_011633
 
|nearest_refseq=NM_011633
 
|nearest_unigene=Mm.380491
 
|nearest_unigene=Mm.380491
|num_trans=9
+
|num_trans=22033
 
|species=mouse
 
|species=mouse
 
|start=192092427
 
|start=192092427

Latest revision as of 10:34, 26 July 2021

Basic information about the TSS


TSS ID:mm_10024.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:192092427
End:192092455
Strand:-
TSS Score:1
Start of the center position in the TSS region:192092441
End of the center position in the TSS region:192092442



Gene and protein annotation


Transcript_name:D83528
Distance:0
GeneID:22033
HGNC/MGI_ID:MGI:107548
UniProt_ID:
Gene_name:TNF receptor-associated factor 5
Gene_symbol:Traf5
Gene_synonyms:
Gene_source:MGI:107548



Transcript annotation


Transcript_name:D83528
Distance:0
Num_trans:22033
All_trans:MGI:107548



TATA-Box annotation


Distance to TSS:158
Nearest PromoterID:NM_011633
Entrez ID:22033
Nearest Unigene:Mm.380491
Nearest Refseq:NM_011633
Nearest Ensembl:
Gene Name:TNF receptor-associated factor 5
Gene Alias:-
Gene Description:TNF receptor-associated factor 5
Gene Type:protein-coding
CpG%:0.12
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):