Difference between revisions of "TSS:Mm 10025.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=D83528:19 BC012702:-73 AK144694:-80 ENSMUST00000085573.11:-90 AK141097:-90 D78141:-95 NM_011633:-130 uc029qvg.2:-130 uc007edg.2:-130 |chr=chr1 |cpg_perc...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:107548 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=135 | |distance_to_tss=135 | ||
|end=192092469 | |end=192092469 | ||
| + | |end_of_center_position=192092464 | ||
|entrez_id=22033 | |entrez_id=22033 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_011633 | |nearest_refseq=NM_011633 | ||
|nearest_unigene=Mm.380491 | |nearest_unigene=Mm.380491 | ||
| − | |num_trans= | + | |num_trans=22033 |
|species=mouse | |species=mouse | ||
|start=192092458 | |start=192092458 | ||
| + | |start_of_center_position=192092463 | ||
|strand=- | |strand=- | ||
|transcript_name=D83528 | |transcript_name=D83528 | ||
Latest revision as of 10:34, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 192092463 |
|---|---|
| End of the center position in the TSS region: | 192092464 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | D83528 |
|---|---|
| Distance: | 19 |
| Num_trans: | 22033 |
| All_trans: | MGI:107548 |
TATA-Box annotation
| Distance to TSS: | 135 |
|---|---|
| Nearest PromoterID: | NM_011633 |
| Entrez ID: | 22033 |
| Nearest Unigene: | Mm.380491 |
| Nearest Refseq: | NM_011633 |
| Nearest Ensembl: | |
| Gene Name: | TNF receptor-associated factor 5 |
| Gene Alias: | - |
| Gene Description: | TNF receptor-associated factor 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
