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Difference between revisions of "TSS:Mm 10025.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=D83528:19 BC012702:-73 AK144694:-80 ENSMUST00000085573.11:-90 AK141097:-90 D78141:-95 NM_011633:-130 uc029qvg.2:-130 uc007edg.2:-130
+
|all_trans=MGI:107548
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 22: Line 22:
 
|nearest_refseq=NM_011633
 
|nearest_refseq=NM_011633
 
|nearest_unigene=Mm.380491
 
|nearest_unigene=Mm.380491
|num_trans=9
+
|num_trans=22033
 
|species=mouse
 
|species=mouse
 
|start=192092458
 
|start=192092458

Latest revision as of 10:34, 26 July 2021

Basic information about the TSS


TSS ID:mm_10025.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:192092458
End:192092469
Strand:-
TSS Score:1
Start of the center position in the TSS region:192092463
End of the center position in the TSS region:192092464



Gene and protein annotation


Transcript_name:D83528
Distance:19
GeneID:22033
HGNC/MGI_ID:MGI:107548
UniProt_ID:
Gene_name:TNF receptor-associated factor 5
Gene_symbol:Traf5
Gene_synonyms:
Gene_source:MGI:107548



Transcript annotation


Transcript_name:D83528
Distance:19
Num_trans:22033
All_trans:MGI:107548



TATA-Box annotation


Distance to TSS:135
Nearest PromoterID:NM_011633
Entrez ID:22033
Nearest Unigene:Mm.380491
Nearest Refseq:NM_011633
Nearest Ensembl:
Gene Name:TNF receptor-associated factor 5
Gene Alias:-
Gene Description:TNF receptor-associated factor 5
Gene Type:protein-coding
CpG%:0.125
GC%:0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):