Difference between revisions of "TSS:Mm 100267.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3652087 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_136918 | |nearest_refseq=NR_136918 | ||
|nearest_unigene=Mm.383716 | |nearest_unigene=Mm.383716 | ||
| − | |num_trans= | + | |num_trans=102637448 |
|species=mouse | |species=mouse | ||
|start=117426202 | |start=117426202 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000151381.1 AK045779 | |transcript_name=ENSMUST00000151381.1 AK045779 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100267.1 | |tss_id=mm_100267.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 10:34, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117426207 |
|---|---|
| End of the center position in the TSS region: | 117426208 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000151381.1 AK045779 |
|---|---|
| Distance: | -25 |
| Num_trans: | 102637448 |
| All_trans: | MGI:3652087 |
TATA-Box annotation
| Distance to TSS: | -4490 |
|---|---|
| Nearest PromoterID: | NR_136918 |
| Entrez ID: | 667423 |
| Nearest Unigene: | Mm.383716 |
| Nearest Refseq: | NR_136918 |
| Nearest Ensembl: | ENSMUSG00000083705 |
| Gene Name: | predicted gene 11732 |
| Gene Alias: | EG667423|EyeLinc11 |
| Gene Description: | ribosomal protein S23 pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.03 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
