Difference between revisions of "TSS:Mm 100270.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000106344.7:0 AK147471:-65 uc007mnj.2:141 ENSMUST00000141115.7:-226 AK147551:-226 |chr=chr11 |cpg_percent=0.145 |distance=0 |distance_to_tss=52...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2443265 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=522 | |distance_to_tss=522 | ||
|end=117654824 | |end=117654824 | ||
| + | |end_of_center_position=117654812 | ||
|entrez_id=217351 | |entrez_id=217351 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=9930033H14Rik | + | |gene_alias=9930033H14Rik{{!}}mKIAA1582 |
|gene_description=trinucleotide repeat containing 6C | |gene_description=trinucleotide repeat containing 6C | ||
|gene_id=217351 | |gene_id=217351 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2443265 | |hgnc_mgi_id=MGI:2443265 | ||
| + | |mKIAA1582= | ||
|nearest_ensembl=ENSMUSG00000025571 | |nearest_ensembl=ENSMUSG00000025571 | ||
|nearest_promoter_id=NM_198022 | |nearest_promoter_id=NM_198022 | ||
|nearest_refseq=NM_198022 | |nearest_refseq=NM_198022 | ||
|nearest_unigene=Mm.40272 | |nearest_unigene=Mm.40272 | ||
| − | |num_trans= | + | |num_trans=217351 |
|species=mouse | |species=mouse | ||
|start=117654798 | |start=117654798 | ||
| + | |start_of_center_position=117654811 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000106344.7 | |transcript_name=ENSMUST00000106344.7 | ||
Latest revision as of 10:34, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117654811 |
|---|---|
| End of the center position in the TSS region: | 117654812 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106344.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 217351 |
| All_trans: | MGI:2443265 |
TATA-Box annotation
| Distance to TSS: | 522 |
|---|---|
| Nearest PromoterID: | NM_198022 |
| Entrez ID: | 217351 |
| Nearest Unigene: | Mm.40272 |
| Nearest Refseq: | NM_198022 |
| Nearest Ensembl: | ENSMUSG00000025571 |
| Gene Name: | trinucleotide repeat containing 6C |
| Gene Alias: | 9930033H14Rik|mKIAA1582 |
| Gene Description: | trinucleotide repeat containing 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
