Difference between revisions of "TSS:Mm 100274.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|EVER1= | |EVER1= | ||
| − | |all_trans= | + | |all_trans=MGI:2443265 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-109 | |distance=-109 | ||
| − | |distance_to_tss= | + | |distance_to_tss=17142 |
|end=117762513 | |end=117762513 | ||
|end_of_center_position=117762506 | |end_of_center_position=117762506 | ||
|entrez_id=217353 | |entrez_id=217353 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=D11Ertd204e | + | |gene_alias=D11Ertd204e{{!}}EVER1 |
|gene_description=transmembrane channel-like gene family 6 | |gene_description=transmembrane channel-like gene family 6 | ||
|gene_id=217351 | |gene_id=217351 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:2443265 | |hgnc_mgi_id=MGI:2443265 | ||
|nearest_ensembl=ENSMUSG00000025572 | |nearest_ensembl=ENSMUSG00000025572 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_154387 |
|nearest_refseq=NM_145439 | |nearest_refseq=NM_145439 | ||
|nearest_unigene=Mm.286963 | |nearest_unigene=Mm.286963 | ||
| − | |num_trans= | + | |num_trans=217351 |
|species=mouse | |species=mouse | ||
|start=117762498 | |start=117762498 | ||
Latest revision as of 10:34, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117762505 |
|---|---|
| End of the center position in the TSS region: | 117762506 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK137381 |
|---|---|
| Distance: | -109 |
| Num_trans: | 217351 |
| All_trans: | MGI:2443265 |
TATA-Box annotation
| Distance to TSS: | 17142 |
|---|---|
| Nearest PromoterID: | NR_154387 |
| Entrez ID: | 217353 |
| Nearest Unigene: | Mm.286963 |
| Nearest Refseq: | NM_145439 |
| Nearest Ensembl: | ENSMUSG00000025572 |
| Gene Name: | trinucleotide repeat containing 6C |
| Gene Alias: | D11Ertd204e|EVER1 |
| Gene Description: | transmembrane channel-like gene family 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
