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Difference between revisions of "TSS:Mm 100277.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Ever2=
 
|Ever2=
|all_trans=ENSMUST00000117781.7:4 AY236501:4 AK156764:-22 ENSMUST00000106334.8:-44 AK171772:-44 ENSMUST00000050874.13:-62 NM_001195089:-62 NM_001195090:-62 NM_181856:-62 ENSMUST00000119455.1:277 NM_001195088:277 AK143862:277 ENSMUST00000127080.7:-283
+
|all_trans=MGI:2669037
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 24: Line 24:
 
|nearest_refseq=NM_181856
 
|nearest_refseq=NM_181856
 
|nearest_unigene=Mm.116675
 
|nearest_unigene=Mm.116675
|num_trans=13
+
|num_trans=217356
 
|species=mouse
 
|species=mouse
 
|start=117782358
 
|start=117782358

Latest revision as of 10:34, 26 July 2021

Basic information about the TSS


TSS ID:mm_100277.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117782358
End:117782381
Strand:+
TSS Score:1
Start of the center position in the TSS region:117782369
End of the center position in the TSS region:117782370



Gene and protein annotation


Transcript_name:ENSMUST00000117781.7 AY236501
Distance:4
GeneID:217356
HGNC/MGI_ID:MGI:2669037
UniProt_ID:B0QZP7
Gene_name:transmembrane channel-like gene family 8
Gene_symbol:Tmc8
Gene_synonyms:EVIN2 Ever2
Gene_source:MGI:2669037



Transcript annotation


Transcript_name:ENSMUST00000117781.7 AY236501
Distance:4
Num_trans:217356
All_trans:MGI:2669037



TATA-Box annotation


Distance to TSS:73
Nearest PromoterID:NM_181856
Entrez ID:217356
Nearest Unigene:Mm.116675
Nearest Refseq:NM_181856
Nearest Ensembl:ENSMUSG00000050106
Gene Name:transmembrane channel-like gene family 8
Gene Alias:EVIN2|Ever2|mFLJ00400
Gene Description:transmembrane channel-like gene family 8
Gene Type:protein-coding
CpG%:0.02
GC%:0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):