Difference between revisions of "TSS:Mm 100278.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK136329:211 ENSMUST00000156458.1:485 |chr=chr11 |cpg_percent=0.035 |distance=211 |distance_to_tss=-6957 |end=117790703 |entrez_id=77727 |gc_percent=0.5...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2669037 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-6957 | |distance_to_tss=-6957 | ||
|end=117790703 | |end=117790703 | ||
| + | |end_of_center_position=117790703 | ||
|entrez_id=77727 | |entrez_id=77727 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=- | + | |gene_alias=Il-40 |
|gene_description=RIKEN cDNA 6030468B19 gene | |gene_description=RIKEN cDNA 6030468B19 gene | ||
|gene_id=217356 | |gene_id=217356 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_029964 | |nearest_refseq=NM_029964 | ||
|nearest_unigene=Mm.159981 | |nearest_unigene=Mm.159981 | ||
| − | |num_trans= | + | |num_trans=217356 |
|species=mouse | |species=mouse | ||
|start=117790702 | |start=117790702 | ||
| + | |start_of_center_position=117790702 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK136329 | |transcript_name=AK136329 | ||
Latest revision as of 10:35, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 117790702 |
|---|---|
| End of the center position in the TSS region: | 117790703 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK136329 |
|---|---|
| Distance: | 211 |
| Num_trans: | 217356 |
| All_trans: | MGI:2669037 |
TATA-Box annotation
| Distance to TSS: | -6957 |
|---|---|
| Nearest PromoterID: | NM_029964 |
| Entrez ID: | 77727 |
| Nearest Unigene: | Mm.159981 |
| Nearest Refseq: | NM_029964 |
| Nearest Ensembl: | ENSMUSG00000025573 |
| Gene Name: | transmembrane channel-like gene family 8 |
| Gene Alias: | Il-40 |
| Gene Description: | RIKEN cDNA 6030468B19 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
