Difference between revisions of "TSS:Mm 100281.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK020081:12 ENSMUST00000106331.1:-48 NM_029964:-48 uc007mnv.2:-48 |chr=chr11 |cpg_percent=0.015 |distance=12 |distance_to_tss=55 |end=117797723 |entrez_...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1924977 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=55 | |distance_to_tss=55 | ||
|end=117797723 | |end=117797723 | ||
| + | |end_of_center_position=117797716 | ||
|entrez_id=77727 | |entrez_id=77727 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=- | + | |gene_alias=Il-40 |
|gene_description=RIKEN cDNA 6030468B19 gene | |gene_description=RIKEN cDNA 6030468B19 gene | ||
|gene_id=77727 | |gene_id=77727 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_029964 | |nearest_refseq=NM_029964 | ||
|nearest_unigene=Mm.159981 | |nearest_unigene=Mm.159981 | ||
| − | |num_trans= | + | |num_trans=77727 |
|species=mouse | |species=mouse | ||
|start=117797707 | |start=117797707 | ||
| + | |start_of_center_position=117797715 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK020081 | |transcript_name=AK020081 | ||
Latest revision as of 10:35, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 117797715 |
|---|---|
| End of the center position in the TSS region: | 117797716 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK020081 |
|---|---|
| Distance: | 12 |
| Num_trans: | 77727 |
| All_trans: | MGI:1924977 |
TATA-Box annotation
| Distance to TSS: | 55 |
|---|---|
| Nearest PromoterID: | NM_029964 |
| Entrez ID: | 77727 |
| Nearest Unigene: | Mm.159981 |
| Nearest Refseq: | NM_029964 |
| Nearest Ensembl: | ENSMUSG00000025573 |
| Gene Name: | RIKEN cDNA 6030468B19 gene |
| Gene Alias: | Il-40 |
| Gene Description: | RIKEN cDNA 6030468B19 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
