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Difference between revisions of "TSS:Mm 100282.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AK020081:0 ENSMUST00000106331.1:-67 NM_029964:-67
+
|all_trans=MGI:1924977
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_029964
 
|nearest_refseq=NM_029964
 
|nearest_unigene=Mm.159981
 
|nearest_unigene=Mm.159981
|num_trans=3
+
|num_trans=77727
 
|species=mouse
 
|species=mouse
 
|start=117797726
 
|start=117797726

Latest revision as of 10:35, 26 July 2021

Basic information about the TSS


TSS ID:mm_100282.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117797726
End:117797748
Strand:+
TSS Score:1
Start of the center position in the TSS region:117797737
End of the center position in the TSS region:117797738



Gene and protein annotation


Transcript_name:AK020081
Distance:0
GeneID:77727
HGNC/MGI_ID:MGI:1924977
UniProt_ID:
Gene_name:RIKEN cDNA 6030468B19 gene
Gene_symbol:6030468B19Rik
Gene_synonyms:
Gene_source:MGI:1924977



Transcript annotation


Transcript_name:AK020081
Distance:0
Num_trans:77727
All_trans:MGI:1924977



TATA-Box annotation


Distance to TSS:77
Nearest PromoterID:NM_029964
Entrez ID:77727
Nearest Unigene:Mm.159981
Nearest Refseq:NM_029964
Nearest Ensembl:ENSMUSG00000025573
Gene Name:RIKEN cDNA 6030468B19 gene
Gene Alias:Il-40
Gene Description:RIKEN cDNA 6030468B19 gene
Gene Type:protein-coding
CpG%:0.02
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):