Difference between revisions of "TSS:Mm 100285.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000177241.1:0 ENSMUST00000120928.1:0 AK157343:0 AJ002307:0 AF364049:-1 BC004829:-4 ENSMUST00000177131.7:-5 AF151985:-7 ENSMUST00000175737.1:9 A...") |
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans= | + | |all_trans=MGI:1328324 |
+ | |cellugyrin= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
Line 6: | Line 7: | ||
|distance_to_tss=28 | |distance_to_tss=28 | ||
|end=117809703 | |end=117809703 | ||
+ | |end_of_center_position=117809696 | ||
|entrez_id=20973 | |entrez_id=20973 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
− | |gene_alias=Clast2 | + | |gene_alias=Clast2{{!}}cellugyrin |
|gene_description=synaptogyrin 2 | |gene_description=synaptogyrin 2 | ||
|gene_id=20973 | |gene_id=20973 | ||
Line 21: | Line 23: | ||
|nearest_refseq=NM_009304 | |nearest_refseq=NM_009304 | ||
|nearest_unigene=Mm.468228 | |nearest_unigene=Mm.468228 | ||
− | |num_trans= | + | |num_trans=20973 |
|species=mouse | |species=mouse | ||
|start=117809687 | |start=117809687 | ||
+ | |start_of_center_position=117809695 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000177241.1 ENSMUST00000120928.1 AK157343 AJ002307 | |transcript_name=ENSMUST00000177241.1 ENSMUST00000120928.1 AK157343 AJ002307 |
Latest revision as of 10:35, 26 July 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 117809695 |
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End of the center position in the TSS region: | 117809696 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENSMUST00000177241.1 ENSMUST00000120928.1 AK157343 AJ002307 |
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Distance: | 0 |
Num_trans: | 20973 |
All_trans: | MGI:1328324 |
TATA-Box annotation
Distance to TSS: | 28 |
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Nearest PromoterID: | NM_009304 |
Entrez ID: | 20973 |
Nearest Unigene: | Mm.468228 |
Nearest Refseq: | NM_009304 |
Nearest Ensembl: | ENSMUSG00000048277 |
Gene Name: | synaptogyrin 2 |
Gene Alias: | Clast2|cellugyrin |
Gene Description: | synaptogyrin 2 |
Gene Type: | protein-coding |
CpG%: | 0.145 |
GC%: | 0.746269 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |