Difference between revisions of "TSS:Mm 100288.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK216027:-31 AK182581:57 AK206414:57 AK207465:57 AK209714:57 AK214806:57 AK215405:57 AK218231:57 AK208001:209 AK219628:209 AK179476:-315 AK217453:-315 E...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1328324 |
| + | |cellugyrin= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=3789 | |distance_to_tss=3789 | ||
|end=117813464 | |end=117813464 | ||
| + | |end_of_center_position=117813456 | ||
|entrez_id=20973 | |entrez_id=20973 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=Clast2 | + | |gene_alias=Clast2{{!}}cellugyrin |
|gene_description=synaptogyrin 2 | |gene_description=synaptogyrin 2 | ||
|gene_id=20973 | |gene_id=20973 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_009304 | |nearest_refseq=NM_009304 | ||
|nearest_unigene=Mm.468228 | |nearest_unigene=Mm.468228 | ||
| − | |num_trans= | + | |num_trans=20973 |
|species=mouse | |species=mouse | ||
|start=117813447 | |start=117813447 | ||
| + | |start_of_center_position=117813455 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK216027 | |transcript_name=AK216027 | ||
Latest revision as of 10:35, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117813455 |
|---|---|
| End of the center position in the TSS region: | 117813456 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK216027 |
|---|---|
| Distance: | -31 |
| Num_trans: | 20973 |
| All_trans: | MGI:1328324 |
TATA-Box annotation
| Distance to TSS: | 3789 |
|---|---|
| Nearest PromoterID: | NM_009304 |
| Entrez ID: | 20973 |
| Nearest Unigene: | Mm.468228 |
| Nearest Refseq: | NM_009304 |
| Nearest Ensembl: | ENSMUSG00000048277 |
| Gene Name: | synaptogyrin 2 |
| Gene Alias: | Clast2|cellugyrin |
| Gene Description: | synaptogyrin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
