Difference between revisions of "TSS:Mm 10029.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |C730034D20Rik= |
| + | |E130101E15Rik= | ||
| + | |all_trans=MGI:2441920 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=438 | |distance_to_tss=438 | ||
|end=192137627 | |end=192137627 | ||
| + | |end_of_center_position=192137602 | ||
|entrez_id=214742 | |entrez_id=214742 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=4921514E24Rik | + | |gene_alias=4921514E24Rik{{!}}C730034D20Rik{{!}}E130101E15Rik |
|gene_description=REST corepressor 3 | |gene_description=REST corepressor 3 | ||
|gene_id=214742 | |gene_id=214742 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=MGI:2441920 | |hgnc_mgi_id=MGI:2441920 | ||
|nearest_ensembl=ENSMUSG00000037395 | |nearest_ensembl=ENSMUSG00000037395 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001290280 |
|nearest_refseq=NM_144814 | |nearest_refseq=NM_144814 | ||
|nearest_unigene=Mm.207457 | |nearest_unigene=Mm.207457 | ||
| − | |num_trans= | + | |num_trans=214742 |
|species=mouse | |species=mouse | ||
|start=192137576 | |start=192137576 | ||
| + | |start_of_center_position=192137601 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000193144.1 | |transcript_name=ENSMUST00000193144.1 | ||
Latest revision as of 10:35, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 192137601 |
|---|---|
| End of the center position in the TSS region: | 192137602 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000193144.1 |
|---|---|
| Distance: | -33 |
| Num_trans: | 214742 |
| All_trans: | MGI:2441920 |
TATA-Box annotation
| Distance to TSS: | 438 |
|---|---|
| Nearest PromoterID: | NM_001290280 |
| Entrez ID: | 214742 |
| Nearest Unigene: | Mm.207457 |
| Nearest Refseq: | NM_144814 |
| Nearest Ensembl: | ENSMUSG00000037395 |
| Gene Name: | REST corepressor 3 |
| Gene Alias: | 4921514E24Rik|C730034D20Rik|E130101E15Rik |
| Gene Description: | REST corepressor 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
