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Difference between revisions of "TSS:Mm 100290.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK208001:-29 AK219628:-29 AK182581:-181 AK206414:-181 AK207465:-181 AK209714:-181 AK214806:-181 AK215405:-181 AK218231:-181 AK205644:227 AK200733:230 AK216027:-285 AK206778:426
+
|all_trans=MGI:1328324
 
|cellugyrin=
 
|cellugyrin=
 
|chr=chr11
 
|chr=chr11
Line 23: Line 23:
 
|nearest_refseq=NM_009304
 
|nearest_refseq=NM_009304
 
|nearest_unigene=Mm.468228
 
|nearest_unigene=Mm.468228
|num_trans=13
+
|num_trans=20973
 
|species=mouse
 
|species=mouse
 
|start=117813701
 
|start=117813701

Latest revision as of 10:35, 26 July 2021

Basic information about the TSS


TSS ID:mm_100290.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117813701
End:117813736
Strand:+
TSS Score:1
Start of the center position in the TSS region:117813718
End of the center position in the TSS region:117813719



Gene and protein annotation


Transcript_name:AK208001 AK219628
Distance:-29
GeneID:20973
HGNC/MGI_ID:MGI:1328324
UniProt_ID:
Gene_name:synaptogyrin 2
Gene_symbol:Syngr2
Gene_synonyms:Clast2 cellugyrin
Gene_source:MGI:1328324



Transcript annotation


Transcript_name:AK208001 AK219628
Distance:-29
Num_trans:20973
All_trans:MGI:1328324



TATA-Box annotation


Distance to TSS:4052
Nearest PromoterID:NM_009304
Entrez ID:20973
Nearest Unigene:Mm.468228
Nearest Refseq:NM_009304
Nearest Ensembl:ENSMUSG00000048277
Gene Name:synaptogyrin 2
Gene Alias:Clast2|cellugyrin
Gene Description:synaptogyrin 2
Gene Type:protein-coding
CpG%:0.02
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):