Difference between revisions of "TSS:Mm 100292.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK205644:128 AK200733:131 AK208001:-143 AK219628:-143 AK182581:-295 AK206414:-295 AK207465:-295 AK209714:-295 AK214806:-295 AK215405:-295 AK218231:-295...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1328324 |
| + | |cellugyrin= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=4158 | |distance_to_tss=4158 | ||
|end=117813835 | |end=117813835 | ||
| + | |end_of_center_position=117813826 | ||
|entrez_id=20973 | |entrez_id=20973 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=Clast2 | + | |gene_alias=Clast2{{!}}cellugyrin |
|gene_description=synaptogyrin 2 | |gene_description=synaptogyrin 2 | ||
|gene_id=20973 | |gene_id=20973 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_009304 | |nearest_refseq=NM_009304 | ||
|nearest_unigene=Mm.468228 | |nearest_unigene=Mm.468228 | ||
| − | |num_trans= | + | |num_trans=20973 |
|species=mouse | |species=mouse | ||
|start=117813815 | |start=117813815 | ||
| + | |start_of_center_position=117813825 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK205644 | |transcript_name=AK205644 | ||
Latest revision as of 10:35, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 117813825 |
|---|---|
| End of the center position in the TSS region: | 117813826 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK205644 |
|---|---|
| Distance: | 128 |
| Num_trans: | 20973 |
| All_trans: | MGI:1328324 |
TATA-Box annotation
| Distance to TSS: | 4158 |
|---|---|
| Nearest PromoterID: | NM_009304 |
| Entrez ID: | 20973 |
| Nearest Unigene: | Mm.468228 |
| Nearest Refseq: | NM_009304 |
| Nearest Ensembl: | ENSMUSG00000048277 |
| Gene Name: | synaptogyrin 2 |
| Gene Alias: | Clast2|cellugyrin |
| Gene Description: | synaptogyrin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
