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Difference between revisions of "TSS:Mm 100294.1"

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Line 4: Line 4:
 
|KFA=
 
|KFA=
 
|Kf=
 
|Kf=
|all_trans=BC066780:0 BC043309:0 ENSMUST00000149668.1:5 BC024452:5 ENSMUST00000073388.12:-10 AF399717:-10 AY099479:-10 ENSMUST00000153850.1:12 NM_027827:-15 NM_001363160:-15 NM_001363159:-15
+
|all_trans=MGI:2448704
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.065
 
|cpg_percent=0.065
Line 27: Line 27:
 
|nearest_refseq=NM_027827
 
|nearest_refseq=NM_027827
 
|nearest_unigene=Mm.273958
 
|nearest_unigene=Mm.273958
|num_trans=11
+
|num_trans=71562
 
|species=mouse
 
|species=mouse
 
|start=117825933
 
|start=117825933

Latest revision as of 10:35, 26 July 2021

Basic information about the TSS


TSS ID:mm_100294.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117825933
End:117825969
Strand:+
TSS Score:1
Start of the center position in the TSS region:117825951
End of the center position in the TSS region:117825952



Gene and protein annotation


Transcript_name:BC066780 BC043309
Distance:0
GeneID:71562
HGNC/MGI_ID:MGI:2448704
UniProt_ID:
Gene_name:arylformamidase
Gene_symbol:Afmid
Gene_synonyms:9030621K19Rik Kf formylase formylkynureninase kynurenine_formamidase
Gene_source:MGI:2448704



Transcript annotation


Transcript_name:BC066780 BC043309
Distance:0
Num_trans:71562
All_trans:MGI:2448704



TATA-Box annotation


Distance to TSS:32
Nearest PromoterID:NM_001363160
Entrez ID:71562
Nearest Unigene:Mm.273958
Nearest Refseq:NM_027827
Nearest Ensembl:ENSMUSG00000017718
Gene Name:arylformamidase
Gene Alias:9030621K19Rik|Ammd|FKF|KFA|Kf|formylase
Gene Description:arylformamidase
Gene Type:protein-coding
CpG%:0.065
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):