Difference between revisions of "TSS:Mm 10032.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |C730034D20Rik= |
| + | |E130101E15Rik= | ||
| + | |all_trans=MGI:2441920 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=17 | |distance_to_tss=17 | ||
|end=192138047 | |end=192138047 | ||
| + | |end_of_center_position=192138023 | ||
|entrez_id=214742 | |entrez_id=214742 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=4921514E24Rik | + | |gene_alias=4921514E24Rik{{!}}C730034D20Rik{{!}}E130101E15Rik |
|gene_description=REST corepressor 3 | |gene_description=REST corepressor 3 | ||
|gene_id=214742 | |gene_id=214742 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=MGI:2441920 | |hgnc_mgi_id=MGI:2441920 | ||
|nearest_ensembl=ENSMUSG00000037395 | |nearest_ensembl=ENSMUSG00000037395 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001290280 |
|nearest_refseq=NM_144814 | |nearest_refseq=NM_144814 | ||
|nearest_unigene=Mm.207457 | |nearest_unigene=Mm.207457 | ||
| − | |num_trans= | + | |num_trans=214742 |
|species=mouse | |species=mouse | ||
|start=192137998 | |start=192137998 | ||
| + | |start_of_center_position=192138022 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000110849.9 ENSMUST00000073279.12 ENSMUST00000192158.5 ENSMUST00000192491.5 ENSMUST00000194493.1 ENSMUST00000194395.5 ENSMUST00000193322 | + | |transcript_name=ENSMUST00000110849.9 ENSMUST00000073279.12 ENSMUST00000192158.5 ENSMUST00000192491.5 ENSMUST00000194493.1 ENSMUST00000194395.5 ENSMUST00000193322.1 AK135612 AK155440 AK050287 AK040839 AK164939 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_10032.1 | |tss_id=mm_10032.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A0A6YWP7 A0A0A6YWY4 A0A0A6YX54 Q6PGA0 | + | |uniprot_id=A0A0A6YWP7 A0A0A6YWY4 A0A0A6YX54 A0A0A6YXM5 Q6PGA0 |
}} | }} | ||
Latest revision as of 10:35, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 192138022 |
|---|---|
| End of the center position in the TSS region: | 192138023 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000110849.9 ENSMUST00000073279.12 ENSMUST00000192158.5 ENSMUST00000192491.5 ENSMUST00000194493.1 ENSMUST00000194395.5 ENSMUST00000193322.1 AK135612 AK155440 AK050287 AK040839 AK164939 |
|---|---|
| Distance: | 0 |
| Num_trans: | 214742 |
| All_trans: | MGI:2441920 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_001290280 |
| Entrez ID: | 214742 |
| Nearest Unigene: | Mm.207457 |
| Nearest Refseq: | NM_144814 |
| Nearest Ensembl: | ENSMUSG00000037395 |
| Gene Name: | REST corepressor 3 |
| Gene Alias: | 4921514E24Rik|C730034D20Rik|E130101E15Rik |
| Gene Description: | REST corepressor 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
