Difference between revisions of "TSS:Mm 100336.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK019533:-1 |chr=chr11 |cpg_percent=0 |distance=-1 |distance_to_tss=-79 |end=118342619 |entrez_id=58251 |gc_percent=0.537313 |gene_alias=Cep295nl|Ddc8|F...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Ddc8= |
| + | |FS39= | ||
| + | |Kiaa1731nl= | ||
| + | |all_trans=MGI:1925385 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-79 | |distance_to_tss=-79 | ||
|end=118342619 | |end=118342619 | ||
| + | |end_of_center_position=118342614 | ||
|entrez_id=58251 | |entrez_id=58251 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias= | + | |gene_alias=Ddc8{{!}}FS39{{!}}Kiaa1731nl |
| − | |gene_description= | + | |gene_description=CEP295 N-terminal like |
|gene_id=78135 | |gene_id=78135 | ||
|gene_name=RIKEN cDNA 4921501M06 gene | |gene_name=RIKEN cDNA 4921501M06 gene | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_021440 | |nearest_refseq=NM_021440 | ||
|nearest_unigene=Mm.439815 | |nearest_unigene=Mm.439815 | ||
| − | |num_trans= | + | |num_trans=78135 |
|species=mouse | |species=mouse | ||
|start=118342607 | |start=118342607 | ||
| + | |start_of_center_position=118342613 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK019533 | |transcript_name=AK019533 | ||
Latest revision as of 10:36, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 118342613 |
|---|---|
| End of the center position in the TSS region: | 118342614 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK019533 |
|---|---|
| Distance: | -1 |
| Num_trans: | 78135 |
| All_trans: | MGI:1925385 |
TATA-Box annotation
| Distance to TSS: | -79 |
|---|---|
| Nearest PromoterID: | NM_021440 |
| Entrez ID: | 58251 |
| Nearest Unigene: | Mm.439815 |
| Nearest Refseq: | NM_021440 |
| Nearest Ensembl: | ENSMUSG00000076433 |
| Gene Name: | RIKEN cDNA 4921501M06 gene |
| Gene Alias: | Ddc8|FS39|Kiaa1731nl |
| Gene Description: | CEP295 N-terminal like |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
