Difference between revisions of "TSS:Mm 10035.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2445118 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=-161 | |distance=-161 | ||
| − | |distance_to_tss= | + | |distance_to_tss=655 |
|end=192834558 | |end=192834558 | ||
| − | |entrez_id= | + | |end_of_center_position=192834558 |
| + | |entrez_id=320952 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=RIKEN cDNA | + | |gene_description=RIKEN cDNA A730013G03 gene |
|gene_id=320952 | |gene_id=320952 | ||
|gene_name=RIKEN cDNA A730013G03 gene | |gene_name=RIKEN cDNA A730013G03 gene | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:2445118 | |hgnc_mgi_id=MGI:2445118 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_155503 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_155503 |
| − | |nearest_unigene=Mm. | + | |nearest_unigene=Mm.100944 |
| − | |num_trans= | + | |num_trans=320952 |
|species=mouse | |species=mouse | ||
|start=192834557 | |start=192834557 | ||
| + | |start_of_center_position=192834557 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000057543.2 AK042646 | |transcript_name=ENSMUST00000057543.2 AK042646 | ||
Latest revision as of 10:36, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 192834557 |
|---|---|
| End of the center position in the TSS region: | 192834558 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000057543.2 AK042646 |
|---|---|
| Distance: | -161 |
| Num_trans: | 320952 |
| All_trans: | MGI:2445118 |
TATA-Box annotation
| Distance to TSS: | 655 |
|---|---|
| Nearest PromoterID: | NR_155503 |
| Entrez ID: | 320952 |
| Nearest Unigene: | Mm.100944 |
| Nearest Refseq: | NR_155503 |
| Nearest Ensembl: | |
| Gene Name: | RIKEN cDNA A730013G03 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA A730013G03 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
