Difference between revisions of "TSS:Mm 100352.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|CTRP1= | |CTRP1= | ||
|Zsig37= | |Zsig37= | ||
| − | |all_trans=NM_001204129 | + | |all_trans=NM_001204129:-2 ENSMUST00000017590.8:31 AK005484:31 BC049894:48 ENSMUST00000124861.1:-256 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 11: | Line 11: | ||
|entrez_id=56745 | |entrez_id=56745 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=1600017K21Rik | + | |gene_alias=1600017K21Rik{{!}}Adip{{!}}CTRP1{{!}}Zsig37 |
|gene_description=C1q and tumor necrosis factor related protein 1 | |gene_description=C1q and tumor necrosis factor related protein 1 | ||
|gene_id=56745 | |gene_id=56745 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_019959 | |nearest_refseq=NM_019959 | ||
|nearest_unigene=Mm.23845 | |nearest_unigene=Mm.23845 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=118428458 | |start=118428458 | ||
|start_of_center_position=118428463 | |start_of_center_position=118428463 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001204129 | + | |transcript_name=NM_001204129.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100352.1 | |tss_id=mm_100352.1 | ||
Latest revision as of 10:36, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 118428463 |
|---|---|
| End of the center position in the TSS region: | 118428464 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001204129.1 |
|---|---|
| Distance: | -2 |
| Num_trans: | 5 |
| All_trans: | NM_001204129:-2 ENSMUST00000017590.8:31 AK005484:31 BC049894:48 ENSMUST00000124861.1:-256 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_001204129 |
| Entrez ID: | 56745 |
| Nearest Unigene: | Mm.23845 |
| Nearest Refseq: | NM_019959 |
| Nearest Ensembl: | ENSMUSG00000017446 |
| Gene Name: | C1q and tumor necrosis factor related protein 1 |
| Gene Alias: | 1600017K21Rik|Adip|CTRP1|Zsig37 |
| Gene Description: | C1q and tumor necrosis factor related protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
