Difference between revisions of "TSS:Mm 100396.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.06 |distance= |distance_to_tss=203 |end=119390683 |entrez_id=100316690 |gc_percent=0.61194 |gene_alias=mir-1932|mmu-mir-1932 |gene_descri...") |
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=-196 |
|distance_to_tss=203 | |distance_to_tss=203 | ||
|end=119390683 | |end=119390683 | ||
| + | |end_of_center_position=119390676 | ||
|entrez_id=100316690 | |entrez_id=100316690 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=mir-1932 | + | |gene_alias=mir-1932{{!}}mmu-mir-1932 |
|gene_description=microRNA 1932 | |gene_description=microRNA 1932 | ||
|gene_name=Mir1932 | |gene_name=Mir1932 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |mmu-mir-1932= | ||
|nearest_ensembl=ENSMUSG00000088015 | |nearest_ensembl=ENSMUSG00000088015 | ||
|nearest_promoter_id=NR_035453 | |nearest_promoter_id=NR_035453 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=119390667 | |start=119390667 | ||
| + | |start_of_center_position=119390675 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NR_035453.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100396.1 | |tss_id=mm_100396.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 10:37, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119390675 |
|---|---|
| End of the center position in the TSS region: | 119390676 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_035453.1 |
|---|---|
| Distance: | -196 |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 203 |
|---|---|
| Nearest PromoterID: | NR_035453 |
| Entrez ID: | 100316690 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_035453 |
| Nearest Ensembl: | ENSMUSG00000088015 |
| Gene Name: | Mir1932 |
| Gene Alias: | mir-1932|mmu-mir-1932 |
| Gene Description: | microRNA 1932 |
| Gene Type: | ncRNA |
| CpG%: | 0.06 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
