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Difference between revisions of "TSS:Mm 100412.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=U76755:0 U76754:0
+
|all_trans=MGI:1289196
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 23: Line 23:
 
|nearest_refseq=NR_035453
 
|nearest_refseq=NR_035453
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=2
+
|num_trans=672511
 
|species=mouse
 
|species=mouse
 
|start=119426059
 
|start=119426059

Latest revision as of 10:37, 26 July 2021

Basic information about the TSS


TSS ID:mm_100412.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:119426059
End:119426070
Strand:+
TSS Score:1
Start of the center position in the TSS region:119426064
End of the center position in the TSS region:119426065



Gene and protein annotation


Transcript_name:U76755 U76754
Distance:0
GeneID:672511
HGNC/MGI_ID:MGI:1289196
UniProt_ID:O55132
Gene_name:ring finger protein 213
Gene_symbol:Rnf213
Gene_synonyms:D11Ertd759e
Gene_source:MGI:1289196



Transcript annotation


Transcript_name:U76755 U76754
Distance:0
Num_trans:672511
All_trans:MGI:1289196



TATA-Box annotation


Distance to TSS:35593
Nearest PromoterID:NR_035453
Entrez ID:100316690
Nearest Unigene:
Nearest Refseq:NR_035453
Nearest Ensembl:ENSMUSG00000088015
Gene Name:ring finger protein 213
Gene Alias:mir-1932|mmu-mir-1932
Gene Description:microRNA 1932
Gene Type:ncRNA
CpG%:0.025
GC%:0.482587
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-82(TTTTTTATAGTC,+,0.00)