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Difference between revisions of "TSS:Mm 100436.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=BC022698:-146
+
|all_trans=MGI:1289196
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NR_153849
 
|nearest_refseq=NR_153849
 
|nearest_unigene=Mm.440446
 
|nearest_unigene=Mm.440446
|num_trans=1
+
|num_trans=672511
 
|species=mouse
 
|species=mouse
 
|start=119486184
 
|start=119486184

Latest revision as of 10:38, 26 July 2021

Basic information about the TSS


TSS ID:mm_100436.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:119486184
End:119486204
Strand:+
TSS Score:1
Start of the center position in the TSS region:119486194
End of the center position in the TSS region:119486195



Gene and protein annotation


Transcript_name:BC022698
Distance:-146
GeneID:672511
HGNC/MGI_ID:MGI:1289196
UniProt_ID:
Gene_name:ring finger protein 213
Gene_symbol:Rnf213
Gene_synonyms:D11Ertd759e
Gene_source:MGI:1289196



Transcript annotation


Transcript_name:BC022698
Distance:-146
Num_trans:672511
All_trans:MGI:1289196



TATA-Box annotation


Distance to TSS:5041
Nearest PromoterID:NR_153849
Entrez ID:78439
Nearest Unigene:Mm.440446
Nearest Refseq:NR_153849
Nearest Ensembl:ENSMUSG00000109408
Gene Name:ring finger protein 213
Gene Alias:Gm44935
Gene Description:RIKEN cDNA A930037H05 gene
Gene Type:ncRNA
CpG%:0.01
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):