Personal tools

Difference between revisions of "TSS:Mm 100448.1"

From referenceTSS

Jump to: navigation, search
 
Line 2: Line 2:
 
|Rap=
 
|Rap=
 
|Raptor=
 
|Raptor=
|all_trans=ENSMUST00000130049.7:0 ENSMUST00000147772.7:0 AK087217:0 AK029341:0 AK144082:0 AK172276:0 ENSMUST00000125583.7:-77 NM_001306081:-77 NM_028898:-77 AK161011:-77 ENSMUST00000026671.12:115
+
|all_trans=MGI:1921620
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.055
 
|cpg_percent=0.055
Line 25: Line 25:
 
|nearest_refseq=NM_028898
 
|nearest_refseq=NM_028898
 
|nearest_unigene=Mm.209933
 
|nearest_unigene=Mm.209933
|num_trans=11
+
|num_trans=74370
 
|species=mouse
 
|species=mouse
 
|start=119602981
 
|start=119602981

Latest revision as of 10:38, 26 July 2021

Basic information about the TSS


TSS ID:mm_100448.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:119602981
End:119603034
Strand:+
TSS Score:1
Start of the center position in the TSS region:119603007
End of the center position in the TSS region:119603008



Gene and protein annotation


Transcript_name:ENSMUST00000130049.7 ENSMUST00000147772.7 AK087217 AK029341 AK144082 AK172276
Distance:0
GeneID:74370
HGNC/MGI_ID:MGI:1921620
UniProt_ID:
Gene_name:regulatory associated protein of MTOR, complex 1
Gene_symbol:Rptor
Gene_synonyms:4932417H02Rik Rap raptor
Gene_source:MGI:1921620



Transcript annotation


Transcript_name:ENSMUST00000130049.7 ENSMUST00000147772.7 AK087217 AK029341 AK144082 AK172276
Distance:0
Num_trans:74370
All_trans:MGI:1921620



TATA-Box annotation


Distance to TSS:103
Nearest PromoterID:NM_001306081
Entrez ID:74370
Nearest Unigene:Mm.209933
Nearest Refseq:NM_028898
Nearest Ensembl:ENSMUSG00000025583
Gene Name:regulatory associated protein of MTOR, complex 1
Gene Alias:4932417H02Rik|Rap|Raptor|mKIAA1303
Gene Description:regulatory associated protein of MTOR, complex 1
Gene Type:protein-coding
CpG%:0.055
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):