Difference between revisions of "TSS:Mm 100448.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|Rap= | |Rap= | ||
|Raptor= | |Raptor= | ||
| − | |all_trans= | + | |all_trans=MGI:1921620 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 11: | Line 11: | ||
|entrez_id=74370 | |entrez_id=74370 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=4932417H02Rik | + | |gene_alias=4932417H02Rik{{!}}Rap{{!}}Raptor{{!}}mKIAA1303 |
| − | |gene_description= | + | |gene_description=regulatory associated protein of MTOR, complex 1 |
|gene_id=74370 | |gene_id=74370 | ||
| − | |gene_name= | + | |gene_name=regulatory associated protein of MTOR, complex 1 |
|gene_source=MGI:1921620 | |gene_source=MGI:1921620 | ||
|gene_symbol=Rptor | |gene_symbol=Rptor | ||
| Line 22: | Line 22: | ||
|mKIAA1303= | |mKIAA1303= | ||
|nearest_ensembl=ENSMUSG00000025583 | |nearest_ensembl=ENSMUSG00000025583 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001306081 |
|nearest_refseq=NM_028898 | |nearest_refseq=NM_028898 | ||
|nearest_unigene=Mm.209933 | |nearest_unigene=Mm.209933 | ||
| − | |num_trans= | + | |num_trans=74370 |
|species=mouse | |species=mouse | ||
|start=119602981 | |start=119602981 | ||
|start_of_center_position=119603007 | |start_of_center_position=119603007 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000130049.7 ENSMUST00000147772.7 | + | |transcript_name=ENSMUST00000130049.7 ENSMUST00000147772.7 AK087217 AK029341 AK144082 AK172276 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100448.1 | |tss_id=mm_100448.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 10:38, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119603007 |
|---|---|
| End of the center position in the TSS region: | 119603008 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000130049.7 ENSMUST00000147772.7 AK087217 AK029341 AK144082 AK172276 |
|---|---|
| Distance: | 0 |
| Num_trans: | 74370 |
| All_trans: | MGI:1921620 |
TATA-Box annotation
| Distance to TSS: | 103 |
|---|---|
| Nearest PromoterID: | NM_001306081 |
| Entrez ID: | 74370 |
| Nearest Unigene: | Mm.209933 |
| Nearest Refseq: | NM_028898 |
| Nearest Ensembl: | ENSMUSG00000025583 |
| Gene Name: | regulatory associated protein of MTOR, complex 1 |
| Gene Alias: | 4932417H02Rik|Rap|Raptor|mKIAA1303 |
| Gene Description: | regulatory associated protein of MTOR, complex 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
