Difference between revisions of "TSS:Mm 100465.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3583942 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
|end=119913854 | |end=119913854 | ||
| + | |end_of_center_position=119913829 | ||
|entrez_id=208092 | |entrez_id=208092 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001085498 | |nearest_refseq=NM_001085498 | ||
|nearest_unigene=Mm.306673 | |nearest_unigene=Mm.306673 | ||
| − | |num_trans= | + | |num_trans=208092 |
|species=mouse | |species=mouse | ||
|start=119913802 | |start=119913802 | ||
| + | |start_of_center_position=119913828 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000026434.12 ENSMUST00000124199.7 | + | |transcript_name=ENSMUST00000026434.12 ENSMUST00000124199.7 BC147754 BC147755 AK172123 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100465.1 | |tss_id=mm_100465.1 | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119913828 |
|---|---|
| End of the center position in the TSS region: | 119913829 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000026434.12 ENSMUST00000124199.7 BC147754 BC147755 AK172123 |
|---|---|
| Distance: | 0 |
| Num_trans: | 208092 |
| All_trans: | MGI:3583942 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001085498 |
| Entrez ID: | 208092 |
| Nearest Unigene: | Mm.306673 |
| Nearest Refseq: | NM_001085498 |
| Nearest Ensembl: | ENSMUSG00000025371 |
| Gene Name: | charged multivesicular body protein 6 |
| Gene Alias: | 2400004G01Rik |
| Gene Description: | charged multivesicular body protein 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
