Difference between revisions of "TSS:Mm 100474.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000106223.3:0 ENSMUST00000185558.1:0 NM_001110242:0 uc007mru.2:0 AK010111:0 AK007756:0 BC147711:0 BC147720:0 ENSMUST00000186913.1:116 |chr=chr1...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1913676 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=13 | |distance_to_tss=13 | ||
|end=120098983 | |end=120098983 | ||
| + | |end_of_center_position=120098947 | ||
|entrez_id=208501 | |entrez_id=208501 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=1810043H04Rik | |gene_alias=1810043H04Rik | ||
| − | |gene_description=NADH | + | |gene_description=NADH:ubiquinone oxidoreductase complex assembly factor 8 |
|gene_id=208501 | |gene_id=208501 | ||
| − | |gene_name= | + | |gene_name=NADH:ubiquinone oxidoreductase complex assembly factor 8 |
|gene_source=MGI:1913676 | |gene_source=MGI:1913676 | ||
| − | |gene_symbol= | + | |gene_symbol=Ndufaf8 |
| − | |gene_synonyms= | + | |gene_synonyms=1810043H04Rik |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1913676 | |hgnc_mgi_id=MGI:1913676 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001110242 | |nearest_refseq=NM_001110242 | ||
|nearest_unigene=Mm.46699 | |nearest_unigene=Mm.46699 | ||
| − | |num_trans= | + | |num_trans=208501 |
|species=mouse | |species=mouse | ||
|start=120098910 | |start=120098910 | ||
| + | |start_of_center_position=120098946 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=16(GAGCCTAAAAGG,-,0.00) |
| − | |transcript_name=ENSMUST00000106223.3 ENSMUST00000185558.1 | + | |transcript_name=ENSMUST00000106223.3 ENSMUST00000185558.1 AK010111 AK007756 BC147711 BC147720 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100474.1 | |tss_id=mm_100474.1 | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120098946 |
|---|---|
| End of the center position in the TSS region: | 120098947 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106223.3 ENSMUST00000185558.1 AK010111 AK007756 BC147711 BC147720 |
|---|---|
| Distance: | 0 |
| Num_trans: | 208501 |
| All_trans: | MGI:1913676 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_001110242 |
| Entrez ID: | 208501 |
| Nearest Unigene: | Mm.46699 |
| Nearest Refseq: | NM_001110242 |
| Nearest Ensembl: | ENSMUSG00000078572 |
| Gene Name: | NADH:ubiquinone oxidoreductase complex assembly factor 8 |
| Gene Alias: | 1810043H04Rik |
| Gene Description: | NADH:ubiquinone oxidoreductase complex assembly factor 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 16(GAGCCTAAAAGG,-,0.00) |
