Difference between revisions of "TSS:Mm 100476.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3702101 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=803 | |distance_to_tss=803 | ||
|end=120150567 | |end=120150567 | ||
| + | |end_of_center_position=120150548 | ||
|entrez_id=72055 | |entrez_id=72055 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
|gene_alias=1810073N04Rik | |gene_alias=1810073N04Rik | ||
| − | |gene_description= | + | |gene_description=solute carrier family 38, member 10 |
|gene_id= | |gene_id= | ||
|gene_name=predicted gene 11769 | |gene_name=predicted gene 11769 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=MGI:3702101 | |hgnc_mgi_id=MGI:3702101 | ||
|nearest_ensembl=ENSMUSG00000061306 | |nearest_ensembl=ENSMUSG00000061306 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001164798 |
|nearest_refseq=NM_024249 | |nearest_refseq=NM_024249 | ||
|nearest_unigene=Mm.253403 | |nearest_unigene=Mm.253403 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=120150528 | |start=120150528 | ||
| + | |start_of_center_position=120150547 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000140273.1 | + | |transcript_name=ENSMUST00000140273.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100476.1 | |tss_id=mm_100476.1 | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120150547 |
|---|---|
| End of the center position in the TSS region: | 120150548 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000140273.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | |
| All_trans: | MGI:3702101 |
TATA-Box annotation
| Distance to TSS: | 803 |
|---|---|
| Nearest PromoterID: | NM_001164798 |
| Entrez ID: | 72055 |
| Nearest Unigene: | Mm.253403 |
| Nearest Refseq: | NM_024249 |
| Nearest Ensembl: | ENSMUSG00000061306 |
| Gene Name: | predicted gene 11769 |
| Gene Alias: | 1810073N04Rik |
| Gene Description: | solute carrier family 38, member 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
