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Difference between revisions of "TSS:Mm 100484.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|BC060615=
 
|BC060615=
|all_trans=ENSMUST00000142439.1:-49 ENSMUST00000118987.1:175 AB257855:175
+
|all_trans=MGI:2679272
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 23: Line 23:
 
|nearest_refseq=NM_198423
 
|nearest_refseq=NM_198423
 
|nearest_unigene=Mm.309498
 
|nearest_unigene=Mm.309498
|num_trans=3
+
|num_trans=268515
 
|species=mouse
 
|species=mouse
 
|start=120236493
 
|start=120236493

Latest revision as of 10:39, 26 July 2021

Basic information about the TSS


TSS ID:mm_100484.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120236493
End:120236524
Strand:+
TSS Score:1
Start of the center position in the TSS region:120236508
End of the center position in the TSS region:120236509



Gene and protein annotation


Transcript_name:ENSMUST00000142439.1
Distance:-49
GeneID:268515
HGNC/MGI_ID:MGI:2679272
UniProt_ID:
Gene_name:BAH domain and coiled-coil containing 1
Gene_symbol:Bahcc1
Gene_synonyms:
Gene_source:MGI:2679272



Transcript annotation


Transcript_name:ENSMUST00000142439.1
Distance:-49
Num_trans:268515
All_trans:MGI:2679272



TATA-Box annotation


Distance to TSS:3562
Nearest PromoterID:NM_001347621
Entrez ID:268515
Nearest Unigene:Mm.309498
Nearest Refseq:NM_198423
Nearest Ensembl:ENSMUSG00000039741
Gene Name:BAH domain and coiled-coil containing 1
Gene Alias:B930044J06|BC060615
Gene Description:BAH domain and coiled-coil containing 1
Gene Type:protein-coding
CpG%:0.09
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):