Difference between revisions of "TSS:Mm 100486.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK002420:0 AK005967:0 ENSMUST00000143813.1:-5 NR_038126:-5 uc007msj.2:-5 |chr=chr11 |cpg_percent=0.17 |distance=0 |distance_to_tss=54 |end=120348782 |en...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1914088 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=54 | |distance_to_tss=54 | ||
|end=120348782 | |end=120348782 | ||
| + | |end_of_center_position=120348733 | ||
|entrez_id=66838 | |entrez_id=66838 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_038126 | |nearest_refseq=NR_038126 | ||
|nearest_unigene=Mm.375010 | |nearest_unigene=Mm.375010 | ||
| − | |num_trans= | + | |num_trans=66838 |
|species=mouse | |species=mouse | ||
|start=120348682 | |start=120348682 | ||
| + | |start_of_center_position=120348732 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK002420 AK005967 | |transcript_name=AK002420 AK005967 | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120348732 |
|---|---|
| End of the center position in the TSS region: | 120348733 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK002420 AK005967 |
|---|---|
| Distance: | 0 |
| Num_trans: | 66838 |
| All_trans: | MGI:1914088 |
TATA-Box annotation
| Distance to TSS: | 54 |
|---|---|
| Nearest PromoterID: | NR_038126 |
| Entrez ID: | 66838 |
| Nearest Unigene: | Mm.375010 |
| Nearest Refseq: | NR_038126 |
| Nearest Ensembl: | ENSMUSG00000043644 |
| Gene Name: | RIKEN cDNA 0610009L18 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 0610009L18 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.17 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
