Difference between revisions of "TSS:Mm 100487.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK078674:305 ENSMUST00000026445.2:332 NM_172802:332 uc007msk.2:332 AK050002:332 AK044556:334 BC109356:371 BC109357:371 |chr=chr11 |cpg_percent=0.01 |dis...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Ahl8= |
| + | |C630046B20Rik= | ||
| + | |all_trans=MGI:2443337 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-355 | |distance_to_tss=-355 | ||
|end=120361202 | |end=120361202 | ||
| + | |end_of_center_position=120361180 | ||
|entrez_id=238021 | |entrez_id=238021 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=A930022G03 | + | |gene_alias=A930022G03{{!}}Ahl8{{!}}C630046B20Rik |
|gene_description=fascin actin-bundling protein 2 | |gene_description=fascin actin-bundling protein 2 | ||
|gene_id=238021 | |gene_id=238021 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_172802 | |nearest_refseq=NM_172802 | ||
|nearest_unigene=Mm.481403 | |nearest_unigene=Mm.481403 | ||
| − | |num_trans= | + | |num_trans=238021 |
|species=mouse | |species=mouse | ||
|start=120361156 | |start=120361156 | ||
| + | |start_of_center_position=120361179 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK078674 | |transcript_name=AK078674 | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120361179 |
|---|---|
| End of the center position in the TSS region: | 120361180 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK078674 |
|---|---|
| Distance: | 305 |
| Num_trans: | 238021 |
| All_trans: | MGI:2443337 |
TATA-Box annotation
| Distance to TSS: | -355 |
|---|---|
| Nearest PromoterID: | NM_172802 |
| Entrez ID: | 238021 |
| Nearest Unigene: | Mm.481403 |
| Nearest Refseq: | NM_172802 |
| Nearest Ensembl: | ENSMUSG00000025380 |
| Gene Name: | fascin actin-bundling protein 2 |
| Gene Alias: | A930022G03|Ahl8|C630046B20Rik |
| Gene Description: | fascin actin-bundling protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
