Difference between revisions of "TSS:Mm 10049.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000161367.1:0 AY383616:0 BC137605:-15 BC171933:-15 ENSMUST00000160332.7:129 AK161211:130 |chr=chr1 |cpg_percent=0.06 |distance=0 |distance_to_t...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AI115021= |
| + | |T3jam= | ||
| + | |all_trans=MGI:2441706 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=3555 | |distance_to_tss=3555 | ||
|end=193198031 | |end=193198031 | ||
| + | |end_of_center_position=193197991 | ||
|entrez_id=215243 | |entrez_id=215243 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=6030423D04Rik | + | |gene_alias=6030423D04Rik{{!}}AI115021{{!}}T3jam |
|gene_description=TRAF3 interacting protein 3 | |gene_description=TRAF3 interacting protein 3 | ||
|gene_id=215243 | |gene_id=215243 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_153137 | |nearest_refseq=NM_153137 | ||
|nearest_unigene=Mm.261259 | |nearest_unigene=Mm.261259 | ||
| − | |num_trans= | + | |num_trans=215243 |
|species=mouse | |species=mouse | ||
|start=193197950 | |start=193197950 | ||
| + | |start_of_center_position=193197990 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000161367.1 AY383616 | |transcript_name=ENSMUST00000161367.1 AY383616 | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 193197990 |
|---|---|
| End of the center position in the TSS region: | 193197991 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000161367.1 AY383616 |
|---|---|
| Distance: | 0 |
| Num_trans: | 215243 |
| All_trans: | MGI:2441706 |
TATA-Box annotation
| Distance to TSS: | 3555 |
|---|---|
| Nearest PromoterID: | NM_153137 |
| Entrez ID: | 215243 |
| Nearest Unigene: | Mm.261259 |
| Nearest Refseq: | NM_153137 |
| Nearest Ensembl: | ENSMUSG00000037318 |
| Gene Name: | TRAF3 interacting protein 3 |
| Gene Alias: | 6030423D04Rik|AI115021|T3jam |
| Gene Description: | TRAF3 interacting protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
