Difference between revisions of "TSS:Mm 100495.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Hrs= |
| + | |ZFYVE8= | ||
| + | |all_trans=MGI:104681 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=151 | |distance_to_tss=151 | ||
|end=120467799 | |end=120467799 | ||
| + | |end_of_center_position=120467787 | ||
|entrez_id=15239 | |entrez_id=15239 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=Hgr | + | |gene_alias=Hgr{{!}}Hrs{{!}}ZFYVE8{{!}}tn |
|gene_description=HGF-regulated tyrosine kinase substrate | |gene_description=HGF-regulated tyrosine kinase substrate | ||
|gene_id=15239 | |gene_id=15239 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=MGI:104681 | |hgnc_mgi_id=MGI:104681 | ||
|nearest_ensembl=ENSMUSG00000025793 | |nearest_ensembl=ENSMUSG00000025793 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_008244 |
|nearest_refseq=NM_008244 | |nearest_refseq=NM_008244 | ||
|nearest_unigene=Mm.7919 | |nearest_unigene=Mm.7919 | ||
| − | |num_trans= | + | |num_trans=15239 |
|species=mouse | |species=mouse | ||
|start=120467773 | |start=120467773 | ||
| + | |start_of_center_position=120467786 | ||
|strand=+ | |strand=+ | ||
| + | |tn= | ||
|transcript_name=AK195076 | |transcript_name=AK195076 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120467786 |
|---|---|
| End of the center position in the TSS region: | 120467787 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK195076 |
|---|---|
| Distance: | -33 |
| Num_trans: | 15239 |
| All_trans: | MGI:104681 |
TATA-Box annotation
| Distance to TSS: | 151 |
|---|---|
| Nearest PromoterID: | NM_008244 |
| Entrez ID: | 15239 |
| Nearest Unigene: | Mm.7919 |
| Nearest Refseq: | NM_008244 |
| Nearest Ensembl: | ENSMUSG00000025793 |
| Gene Name: | HGF-regulated tyrosine kinase substrate |
| Gene Alias: | Hgr|Hrs|ZFYVE8|tn |
| Gene Description: | HGF-regulated tyrosine kinase substrate |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
