Difference between revisions of "TSS:Mm 100498.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |1500031N16Rik= |
| + | |MRP-L12= | ||
| + | |Rpml12= | ||
| + | |all_trans=MGI:104681 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-394 | |distance=-394 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-4587 |
|end=120480058 | |end=120480058 | ||
| + | |end_of_center_position=120480050 | ||
|entrez_id=56282 | |entrez_id=56282 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=0610034O11Rik | + | |gene_alias=0610034O11Rik{{!}}1500031N16Rik{{!}}L12mt{{!}}MRP-L12{{!}}Rpml12 |
|gene_description=mitochondrial ribosomal protein L12 | |gene_description=mitochondrial ribosomal protein L12 | ||
|gene_id=15239 | |gene_id=15239 | ||
| Line 21: | Line 25: | ||
|nearest_refseq=NM_027204 | |nearest_refseq=NM_027204 | ||
|nearest_unigene=Mm.133851 | |nearest_unigene=Mm.133851 | ||
| − | |num_trans= | + | |num_trans=15239 |
|species=mouse | |species=mouse | ||
|start=120480041 | |start=120480041 | ||
| + | |start_of_center_position=120480049 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK216327 AK209356 AK205770 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100498.1 | |tss_id=mm_100498.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120480049 |
|---|---|
| End of the center position in the TSS region: | 120480050 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK216327 AK209356 AK205770 |
|---|---|
| Distance: | -394 |
| Num_trans: | 15239 |
| All_trans: | MGI:104681 |
TATA-Box annotation
| Distance to TSS: | -4587 |
|---|---|
| Nearest PromoterID: | NM_027204 |
| Entrez ID: | 56282 |
| Nearest Unigene: | Mm.133851 |
| Nearest Refseq: | NM_027204 |
| Nearest Ensembl: | ENSMUSG00000039640 |
| Gene Name: | HGF-regulated tyrosine kinase substrate |
| Gene Alias: | 0610034O11Rik|1500031N16Rik|L12mt|MRP-L12|Rpml12 |
| Gene Description: | mitochondrial ribosomal protein L12 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
