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Difference between revisions of "TSS:Mm 100502.1"

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Line 3: Line 3:
 
|MRP-L12=
 
|MRP-L12=
 
|Rpml12=
 
|Rpml12=
|all_trans=ENSMUST00000137619.1:-6 BC019565:-362 BC005712:-364 AK168337:-366 AK005328:-366 AK028168:-374 AK002757:-374 AK166969:-392 NM_027204:-396 AK134816:-396 ENSMUST00000043627.7:-420
+
|all_trans=MGI:1926273
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 25: Line 25:
 
|nearest_refseq=NM_027204
 
|nearest_refseq=NM_027204
 
|nearest_unigene=Mm.133851
 
|nearest_unigene=Mm.133851
|num_trans=11
+
|num_trans=56282
 
|species=mouse
 
|species=mouse
 
|start=120485032
 
|start=120485032

Latest revision as of 10:39, 26 July 2021

Basic information about the TSS


TSS ID:mm_100502.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120485032
End:120485049
Strand:+
TSS Score:1
Start of the center position in the TSS region:120485040
End of the center position in the TSS region:120485041



Gene and protein annotation


Transcript_name:ENSMUST00000137619.1
Distance:-6
GeneID:56282
HGNC/MGI_ID:MGI:1926273
UniProt_ID:
Gene_name:mitochondrial ribosomal protein L12
Gene_symbol:Mrpl12
Gene_synonyms:0610034O11Rik 1500031N16Rik MRP-L12 Rpml12
Gene_source:MGI:1926273



Transcript annotation


Transcript_name:ENSMUST00000137619.1
Distance:-6
Num_trans:56282
All_trans:MGI:1926273



TATA-Box annotation


Distance to TSS:404
Nearest PromoterID:NM_027204
Entrez ID:56282
Nearest Unigene:Mm.133851
Nearest Refseq:NM_027204
Nearest Ensembl:ENSMUSG00000039640
Gene Name:mitochondrial ribosomal protein L12
Gene Alias:0610034O11Rik|1500031N16Rik|L12mt|MRP-L12|Rpml12
Gene Description:mitochondrial ribosomal protein L12
Gene Type:protein-coding
CpG%:0.05
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):