Personal tools

Difference between revisions of "TSS:Mm 100516.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENSMUST00000026119.7:0 NM_008101:22 uc011yjd.1:22 uc007mtc.2:22 uc007mtd.2:22 ENSMUST00000147877.7:39 ENSMUST00000128827.7:69 AK004890:69 BC012718:72 AK...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000026119.7:0 NM_008101:22 uc011yjd.1:22 uc007mtc.2:22 uc007mtd.2:22 ENSMUST00000147877.7:39 ENSMUST00000128827.7:69 AK004890:69 BC012718:72 AK144393:75 BC031885:84 BC057988:91
+
|all_trans=MGI:99572
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.16
 
|cpg_percent=0.16
Line 6: Line 6:
 
|distance_to_tss=-30
 
|distance_to_tss=-30
 
|end=120530705
 
|end=120530705
 +
|end_of_center_position=120530697
 
|entrez_id=14527
 
|entrez_id=14527
 
|gc_percent=0.766169
 
|gc_percent=0.766169
Line 21: Line 22:
 
|nearest_refseq=NM_008101
 
|nearest_refseq=NM_008101
 
|nearest_unigene=Mm.22329
 
|nearest_unigene=Mm.22329
|num_trans=12
+
|num_trans=14527
 
|species=mouse
 
|species=mouse
 
|start=120530688
 
|start=120530688
 +
|start_of_center_position=120530696
 
|strand=+
 
|strand=+
 
|transcript_name=ENSMUST00000026119.7
 
|transcript_name=ENSMUST00000026119.7

Latest revision as of 10:40, 26 July 2021

Basic information about the TSS


TSS ID:mm_100516.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120530688
End:120530705
Strand:+
TSS Score:1
Start of the center position in the TSS region:120530696
End of the center position in the TSS region:120530697



Gene and protein annotation


Transcript_name:ENSMUST00000026119.7
Distance:0
GeneID:14527
HGNC/MGI_ID:MGI:99572
UniProt_ID:Q61606
Gene_name:glucagon receptor
Gene_symbol:Gcgr
Gene_synonyms:GR
Gene_source:MGI:99572



Transcript annotation


Transcript_name:ENSMUST00000026119.7
Distance:0
Num_trans:14527
All_trans:MGI:99572



TATA-Box annotation


Distance to TSS:-30
Nearest PromoterID:NM_008101
Entrez ID:14527
Nearest Unigene:Mm.22329
Nearest Refseq:NM_008101
Nearest Ensembl:ENSMUSG00000025127
Gene Name:glucagon receptor
Gene Alias:GR
Gene Description:glucagon receptor
Gene Type:protein-coding
CpG%:0.16
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):