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Difference between revisions of "TSS:Mm 100528.1"

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{{TSSDetail
 
{{TSSDetail
 
|R75218=
 
|R75218=
|all_trans=BC023039:39 ENSMUST00000093140.4:-89 NM_001038230:-89 uc007mtn.2:-89 AK136358:-112 AK003244:-119 AK045408:-142 AK003612:-147 AK158224:-178 ENSMUST00000148114.1:-181 ENSMUST00000026128.9:-200 NM_025389:-200 uc007mtm.2:-200
+
|all_trans=MGI:1913406
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.15
 
|cpg_percent=0.15
Line 10: Line 10:
 
|entrez_id=66156
 
|entrez_id=66156
 
|gc_percent=0.736318
 
|gc_percent=0.736318
|gene_alias=1110011I19Rik
+
|gene_alias=1110011I19Rik{{!}}R75218
 
|gene_description=anaphase promoting complex subunit 11
 
|gene_description=anaphase promoting complex subunit 11
 
|gene_id=66156
 
|gene_id=66156
Line 23: Line 23:
 
|nearest_refseq=NM_025389
 
|nearest_refseq=NM_025389
 
|nearest_unigene=Mm.21645
 
|nearest_unigene=Mm.21645
|num_trans=13
+
|num_trans=66156
 
|species=mouse
 
|species=mouse
 
|start=120598620
 
|start=120598620

Latest revision as of 10:40, 26 July 2021

Basic information about the TSS


TSS ID:mm_100528.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120598620
End:120598640
Strand:+
TSS Score:1
Start of the center position in the TSS region:120598630
End of the center position in the TSS region:120598631



Gene and protein annotation


Transcript_name:BC023039
Distance:39
GeneID:66156
HGNC/MGI_ID:MGI:1913406
UniProt_ID:
Gene_name:anaphase promoting complex subunit 11
Gene_symbol:Anapc11
Gene_synonyms:1110011I19Rik
Gene_source:MGI:1913406



Transcript annotation


Transcript_name:BC023039
Distance:39
Num_trans:66156
All_trans:MGI:1913406



TATA-Box annotation


Distance to TSS:98
Nearest PromoterID:NM_001038230
Entrez ID:66156
Nearest Unigene:Mm.21645
Nearest Refseq:NM_025389
Nearest Ensembl:ENSMUSG00000025135
Gene Name:anaphase promoting complex subunit 11
Gene Alias:1110011I19Rik|R75218
Gene Description:anaphase promoting complex subunit 11
Gene Type:protein-coding
CpG%:0.15
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):