Difference between revisions of "TSS:Mm 10053.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |AI115021= |
| + | |T3jam= | ||
| + | |all_trans=MGI:2441706 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-57 | |distance_to_tss=-57 | ||
|end=193201608 | |end=193201608 | ||
| + | |end_of_center_position=193201603 | ||
|entrez_id=215243 | |entrez_id=215243 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=6030423D04Rik | + | |gene_alias=6030423D04Rik{{!}}AI115021{{!}}T3jam |
|gene_description=TRAF3 interacting protein 3 | |gene_description=TRAF3 interacting protein 3 | ||
|gene_id=215243 | |gene_id=215243 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_153137 | |nearest_refseq=NM_153137 | ||
|nearest_unigene=Mm.261259 | |nearest_unigene=Mm.261259 | ||
| − | |num_trans= | + | |num_trans=215243 |
|species=mouse | |species=mouse | ||
|start=193201597 | |start=193201597 | ||
| + | |start_of_center_position=193201602 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000194278.5 ENSMUST00000043550.10 | |transcript_name=ENSMUST00000194278.5 ENSMUST00000043550.10 | ||
Latest revision as of 10:40, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 193201602 |
|---|---|
| End of the center position in the TSS region: | 193201603 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000194278.5 ENSMUST00000043550.10 |
|---|---|
| Distance: | 51 |
| Num_trans: | 215243 |
| All_trans: | MGI:2441706 |
TATA-Box annotation
| Distance to TSS: | -57 |
|---|---|
| Nearest PromoterID: | NM_153137 |
| Entrez ID: | 215243 |
| Nearest Unigene: | Mm.261259 |
| Nearest Refseq: | NM_153137 |
| Nearest Ensembl: | ENSMUSG00000037318 |
| Gene Name: | TRAF3 interacting protein 3 |
| Gene Alias: | 6030423D04Rik|AI115021|T3jam |
| Gene Description: | TRAF3 interacting protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
