Difference between revisions of "TSS:Mm 100532.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000106194.7:0 ENSMUST00000106195.2:0 NM_153288:0 uc007mto.1:0 AK141698:0 ENSMUST00000061309.4:18 AB085945:22 BC134361:22 |chr=chr11 |cpg_percen...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2387153 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
|end=120608487 | |end=120608487 | ||
| + | |end_of_center_position=120608479 | ||
|entrez_id=208990 | |entrez_id=208990 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias= | + | |gene_alias=PPL7{{!}}mPPL7 |
|gene_description=neuropeptide B | |gene_description=neuropeptide B | ||
|gene_id=208990 | |gene_id=208990 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_153288 | |nearest_refseq=NM_153288 | ||
|nearest_unigene=Mm.29444 | |nearest_unigene=Mm.29444 | ||
| − | |num_trans= | + | |num_trans=208990 |
|species=mouse | |species=mouse | ||
|start=120608469 | |start=120608469 | ||
| + | |start_of_center_position=120608478 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000106194.7 ENSMUST00000106195.2 | + | |transcript_name=ENSMUST00000106194.7 ENSMUST00000106195.2 AK141698 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100532.1 | |tss_id=mm_100532.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A2ABY0 Q3UR83 Q8K4P1 | + | |uniprot_id=A2ABY0 A2ABY2 Q3UR83 Q8K4P1 |
}} | }} | ||
Latest revision as of 10:40, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120608478 |
|---|---|
| End of the center position in the TSS region: | 120608479 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000106194.7 ENSMUST00000106195.2 AK141698 |
|---|---|
| Distance: | 0 |
| Num_trans: | 208990 |
| All_trans: | MGI:2387153 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001347616 |
| Entrez ID: | 208990 |
| Nearest Unigene: | Mm.29444 |
| Nearest Refseq: | NM_153288 |
| Nearest Ensembl: | ENSMUSG00000044034 |
| Gene Name: | neuropeptide B |
| Gene Alias: | PPL7|mPPL7 |
| Gene Description: | neuropeptide B |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
