Difference between revisions of "TSS:Mm 100538.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000181502.1:7 AK163532:7 AK142663:-319 |chr=chr11 |cpg_percent=0.125 |distance=7 |distance_to_tss=-193 |end=120633761 |entrez_id=17134 |gc_perc...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |C630022N07Rik= |
| + | |all_trans=MGI:4937220 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-193 | |distance_to_tss=-193 | ||
|end=120633761 | |end=120633761 | ||
| + | |end_of_center_position=120633741 | ||
|entrez_id=17134 | |entrez_id=17134 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=AA545192 | + | |gene_alias=AA545192{{!}}C630022N07Rik |
| − | |gene_description= | + | |gene_description=v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) |
| − | |gene_id= | + | |gene_id=115487829 |
| − | |gene_name= | + | |gene_name=predicted gene, 17586 |
|gene_source=MGI:4937220 | |gene_source=MGI:4937220 | ||
|gene_symbol=Gm17586 | |gene_symbol=Gm17586 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_010756 | |nearest_refseq=NM_010756 | ||
|nearest_unigene=Mm.268010 | |nearest_unigene=Mm.268010 | ||
| − | |num_trans= | + | |num_trans=115487829 |
|species=mouse | |species=mouse | ||
|start=120633719 | |start=120633719 | ||
| + | |start_of_center_position=120633740 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=KY467628 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100538.1 | |tss_id=mm_100538.1 | ||
Latest revision as of 10:40, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120633740 |
|---|---|
| End of the center position in the TSS region: | 120633741 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KY467628 |
|---|---|
| Distance: | 7 |
| Num_trans: | 115487829 |
| All_trans: | MGI:4937220 |
TATA-Box annotation
| Distance to TSS: | -193 |
|---|---|
| Nearest PromoterID: | NM_010756 |
| Entrez ID: | 17134 |
| Nearest Unigene: | Mm.268010 |
| Nearest Refseq: | NM_010756 |
| Nearest Ensembl: | ENSMUSG00000051510 |
| Gene Name: | predicted gene, 17586 |
| Gene Alias: | AA545192|C630022N07Rik |
| Gene Description: | v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
