Difference between revisions of "TSS:Mm 10054.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc007eef.1:-64 AK167419:-64 ENSMUST00000160929.7:-65 ENSMUST00000162842.2:84 |chr=chr1 |cpg_percent=0.01 |distance=-64 |distance_to_tss=840 |end=1932415...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:103562 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=840 | |distance_to_tss=840 | ||
|end=193241533 | |end=193241533 | ||
| + | |end_of_center_position=193241521 | ||
|entrez_id=15483 | |entrez_id=15483 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_008288 | |nearest_refseq=NM_008288 | ||
|nearest_unigene=Mm.28328 | |nearest_unigene=Mm.28328 | ||
| − | |num_trans= | + | |num_trans=15483 |
|species=mouse | |species=mouse | ||
|start=193241507 | |start=193241507 | ||
| + | |start_of_center_position=193241520 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK167419 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_10054.1 | |tss_id=mm_10054.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 10:40, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 193241520 |
|---|---|
| End of the center position in the TSS region: | 193241521 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK167419 |
|---|---|
| Distance: | -64 |
| Num_trans: | 15483 |
| All_trans: | MGI:103562 |
TATA-Box annotation
| Distance to TSS: | 840 |
|---|---|
| Nearest PromoterID: | NM_001044751 |
| Entrez ID: | 15483 |
| Nearest Unigene: | Mm.28328 |
| Nearest Refseq: | NM_008288 |
| Nearest Ensembl: | ENSMUSG00000016194 |
| Gene Name: | hydroxysteroid 11-beta dehydrogenase 1 |
| Gene Alias: | - |
| Gene Description: | hydroxysteroid 11-beta dehydrogenase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
