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Difference between revisions of "TSS:Mm 100549.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000151852.1:-1 BC023296:-6 NM_153545:-26 AK153361:-26 ENSMUST00000145781.7:-28 AK081566:-28 ENSMUST00000026139.13:-54
+
|all_trans=MGI:2387183
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 22: Line 22:
 
|nearest_refseq=NM_153545
 
|nearest_refseq=NM_153545
 
|nearest_unigene=Mm.347545
 
|nearest_unigene=Mm.347545
|num_trans=7
+
|num_trans=217366
 
|species=mouse
 
|species=mouse
 
|start=120713978
 
|start=120713978

Latest revision as of 10:40, 26 July 2021

Basic information about the TSS


TSS ID:mm_100549.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120713978
End:120713999
Strand:+
TSS Score:1
Start of the center position in the TSS region:120713988
End of the center position in the TSS region:120713989



Gene and protein annotation


Transcript_name:ENSMUST00000151852.1
Distance:-1
GeneID:217366
HGNC/MGI_ID:MGI:2387183
UniProt_ID:A2AC11
Gene_name:leucine rich repeat containing 45
Gene_symbol:Lrrc45
Gene_synonyms:
Gene_source:MGI:2387183



Transcript annotation


Transcript_name:ENSMUST00000151852.1
Distance:-1
Num_trans:217366
All_trans:MGI:2387183



TATA-Box annotation


Distance to TSS:36
Nearest PromoterID:NM_153545
Entrez ID:217366
Nearest Unigene:Mm.347545
Nearest Refseq:NM_153545
Nearest Ensembl:ENSMUSG00000025145
Gene Name:leucine rich repeat containing 45
Gene Alias:BC023296
Gene Description:leucine rich repeat containing 45
Gene Type:protein-coding
CpG%:0.075
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):