Difference between revisions of "TSS:Mm 10055.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001044751:0 uc007eeg.1:0 AK149518:0 AK165212:0 S75207:40 DQ089001:85 ENSMUST00000016338.14:-261 |chr=chr1 |cpg_percent=0.025 |distance=0 |distance_to...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:103562 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
|end=193242368 | |end=193242368 | ||
| + | |end_of_center_position=193242358 | ||
|entrez_id=15483 | |entrez_id=15483 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_008288 | |nearest_refseq=NM_008288 | ||
|nearest_unigene=Mm.28328 | |nearest_unigene=Mm.28328 | ||
| − | |num_trans= | + | |num_trans=15483 |
|species=mouse | |species=mouse | ||
|start=193242346 | |start=193242346 | ||
| + | |start_of_center_position=193242357 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK149518 AK165212 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_10055.1 | |tss_id=mm_10055.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q4JHD9 |
}} | }} | ||
Latest revision as of 10:40, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 193242357 |
|---|---|
| End of the center position in the TSS region: | 193242358 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK149518 AK165212 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15483 |
| All_trans: | MGI:103562 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_001044751 |
| Entrez ID: | 15483 |
| Nearest Unigene: | Mm.28328 |
| Nearest Refseq: | NM_008288 |
| Nearest Ensembl: | ENSMUSG00000016194 |
| Gene Name: | hydroxysteroid 11-beta dehydrogenase 1 |
| Gene Alias: | - |
| Gene Description: | hydroxysteroid 11-beta dehydrogenase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
